Package index • caugi

Caugi Graph

caugi_graph(): Create a caugi_graph from edge expressions.

Queries

ancestors(): Get ancestors of nodes in a caugi_graph

children(): Get children of nodes in a caugi_graph

descendants(): Get descendants of nodes in a caugi_graph

edge_types(): Get the edge types of a caugi_graph.

edges() E(): Get edges of a caugi_graph.

exogenous(): Get all exogenous nodes in a caugi_graph

is_acyclic(): Is the caugi acyclic?

is_caugi(): Is it a caugi graph?

is_cpdag(): Is the caugi graph a CPDAG?

is_dag(): Is the caugi graph a DAG?

is_empty_caugi(): Is the caugi graph empty?

is_pdag(): Is the caugi graph a PDAG?

markov_blanket(): Get Markov blanket of nodes in a caugi_graph

neighbors() neighbours(): Get neighbors of nodes in a caugi_graph

nodes() vertices() V(): Get nodes or edges of a caugi_graph

parents(): Get parents of nodes in a caugi_graph

same_nodes(): Same nodes?

subgraph(): Get the induced subgraph

Verbs

build(): Build the graph now

add_edges() remove_edges() set_edges() add_nodes() remove_nodes(): Manipulate nodes and edges of a caugi_graph

Adjustment and d-separation

adjustment_set(): Compute an adjustment set

all_backdoor_sets(): Get all backdoor sets up to a certain size.

d_separated(): Are X and Y d-separated given Z?

is_valid_backdoor(): Is a backdoor set valid?

Simulation

generate_graph(): Generate a caugi_graph using Erdős-Rényi.

Metrics

aid(): Adjustment Identification Distance

hd(): Hamming Distance

shd(): Structural Hamming Distance

Edge Registry

register_caugi_edge(): Register a new edge type in the global registry.

caugi_registry() reset_caugi_registry() seal_caugi_registry(): caugi edge registry

Methods

length: Length of a caugi_graph

print: Print a caugi_graph

Conversions

as_adjacency(): Convert a caugi_graph to an adjacency matrix

as_bnlearn(): Convert a caugi_graph to a bnlearn network

as_caugi(): Convert to a caugi_graph

as_dagitty(): Convert a caugi_graph to a dagitty graph

as_igraph(): Convert a caugi_graph to an igraph object